Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
Lsm3P62311 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm3P62311 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lsm3P62311 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm3P62311 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lsm3P62311 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm3P62311 Mir1199-201ENSMUST00000117015 119 ntBASIC13.69□□□□□ -0.22
Lsm3P62311 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm3P62311 Gm37856-201ENSMUST00000191634 999 ntBASIC13.69□□□□□ -0.22
Lsm3P62311 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lsm3P62311 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lsm3P62311 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lsm3P62311 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm3P62311 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm3P62311 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.68□□□□□ -0.22
Lsm3P62311 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm3P62311 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.68□□□□□ -0.22
Lsm3P62311 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm3P62311 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lsm3P62311 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm3P62311 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm3P62311 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm3P62311 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm3P62311 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Lsm3P62311 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.67□□□□□ -0.22
Lsm3P62311 Mir6404-201ENSMUST00000183699 94 ntBASIC13.67□□□□□ -0.22
Lsm3P62311 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lsm3P62311 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lsm3P62311 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm3P62311 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm3P62311 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.66□□□□□ -0.22
Lsm3P62311 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.66□□□□□ -0.22
Lsm3P62311 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm3P62311 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 Gm12008-201ENSMUST00000117791 755 ntBASIC13.66□□□□□ -0.22
Lsm3P62311 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm3P62311 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms