Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.74■□□□□ 0.27
Tpm1P58771 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tpm1P58771 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.73■□□□□ 0.27
Tpm1P58771 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.73■□□□□ 0.27
Tpm1P58771 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.73■□□□□ 0.27
Tpm1P58771 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tpm1P58771 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Tpm1P58771 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tpm1P58771 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tpm1P58771 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tpm1P58771 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tpm1P58771 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tpm1P58771 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Tpm1P58771 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tpm1P58771 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tpm1P58771 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.72■□□□□ 0.27
Tpm1P58771 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tpm1P58771 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tpm1P58771 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tpm1P58771 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tpm1P58771 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tpm1P58771 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.71■□□□□ 0.27
Tpm1P58771 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.71■□□□□ 0.27
Tpm1P58771 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.71■□□□□ 0.27
Tpm1P58771 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.71■□□□□ 0.27
Tpm1P58771 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tpm1P58771 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tpm1P58771 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.71■□□□□ 0.26
Tpm1P58771 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tpm1P58771 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tpm1P58771 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tpm1P58771 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Tpm1P58771 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Tpm1P58771 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.7■□□□□ 0.26
Tpm1P58771 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.7■□□□□ 0.26
Tpm1P58771 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tpm1P58771 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.7■□□□□ 0.26
Tpm1P58771 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Tpm1P58771 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms