Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.16■□□□□ 0.02
Lhx3P50481 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Lhx3P50481 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx3P50481 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.15■□□□□ 0.02
Lhx3P50481 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lhx3P50481 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lhx3P50481 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.15■□□□□ 0.02
Lhx3P50481 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.15■□□□□ 0.02
Lhx3P50481 Gm13464-201ENSMUST00000119418 935 ntBASIC15.15■□□□□ 0.02
Lhx3P50481 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.15■□□□□ 0.02
Lhx3P50481 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.15■□□□□ 0.02
Lhx3P50481 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.15■□□□□ 0.02
Lhx3P50481 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.15■□□□□ 0.02
Lhx3P50481 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx3P50481 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lhx3P50481 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.14■□□□□ 0.01
Lhx3P50481 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.14■□□□□ 0.01
Lhx3P50481 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.14■□□□□ 0.01
Lhx3P50481 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Lhx3P50481 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Lhx3P50481 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Lhx3P50481 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
Lhx3P50481 Gm18889-201ENSMUST00000174284 929 ntBASIC15.14■□□□□ 0.01
Lhx3P50481 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lhx3P50481 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lhx3P50481 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx3P50481 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms