Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC9.75□□□□□ -0.85
Xcl1P47993 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Gm10138-203ENSMUST00000206952 366 ntBASIC9.75□□□□□ -0.85
Xcl1P47993 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
Xcl1P47993 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Xcl1P47993 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.75□□□□□ -0.85
Xcl1P47993 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Xcl1P47993 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Xcl1P47993 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.74□□□□□ -0.85
Xcl1P47993 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Xcl1P47993 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Xcl1P47993 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gm14780-201ENSMUST00000118387 2737 ntBASIC9.74□□□□□ -0.85
Xcl1P47993 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC9.74□□□□□ -0.85
Xcl1P47993 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gm18958-201ENSMUST00000174258 762 ntBASIC9.74□□□□□ -0.85
Xcl1P47993 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gm45417-201ENSMUST00000209533 758 ntBASIC9.74□□□□□ -0.85
Xcl1P47993 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Xcl1P47993 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Xcl1P47993 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Xcl1P47993 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Xcl1P47993 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Xcl1P47993 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Xcl1P47993 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Xcl1P47993 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms