Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Thap2-203ENSMUST00000218989 527 ntBASIC13.72□□□□□ -0.21
Nkx2-2P42586 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.72□□□□□ -0.21
Nkx2-2P42586 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.72□□□□□ -0.21
Nkx2-2P42586 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-2P42586 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Gm16198-201ENSMUST00000118766 670 ntBASIC13.71□□□□□ -0.21
Nkx2-2P42586 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.71□□□□□ -0.21
Nkx2-2P42586 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-2P42586 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nkx2-2P42586 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.71□□□□□ -0.22
Nkx2-2P42586 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-2P42586 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-2P42586 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-2P42586 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-2P42586 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.7□□□□□ -0.22
Nkx2-2P42586 Gm18206-201ENSMUST00000207027 926 ntBASIC13.7□□□□□ -0.22
Nkx2-2P42586 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-2P42586 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.69□□□□□ -0.22
Nkx2-2P42586 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx2-2P42586 Gm17968-201ENSMUST00000194902 784 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms