Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Abca1P41233 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Abca1P41233 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.48□□□□□ -0.41
Abca1P41233 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Abca1P41233 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Abca1P41233 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.48□□□□□ -0.41
Abca1P41233 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Abca1P41233 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Abca1P41233 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.48□□□□□ -0.41
Abca1P41233 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Rpph1-201ENSMUST00000175096 319 ntBASIC12.48□□□□□ -0.41
Abca1P41233 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Gm27430-201ENSMUST00000184585 107 ntBASIC12.48□□□□□ -0.41
Abca1P41233 Gm44333-201ENSMUST00000197168 107 ntBASIC12.48□□□□□ -0.41
Abca1P41233 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.47□□□□□ -0.41
Abca1P41233 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Abca1P41233 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.47□□□□□ -0.41
Abca1P41233 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Abca1P41233 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Abca1P41233 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.47□□□□□ -0.41
Abca1P41233 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Abca1P41233 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.47□□□□□ -0.41
Abca1P41233 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Abca1P41233 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Abca1P41233 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.46□□□□□ -0.41
Abca1P41233 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Abca1P41233 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Abca1P41233 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Abca1P41233 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Gm13223-201ENSMUST00000118609 747 ntBASIC12.46□□□□□ -0.42
Abca1P41233 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.46□□□□□ -0.42
Abca1P41233 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Abca1P41233 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Gm2423-201ENSMUST00000074863 733 ntBASIC12.46□□□□□ -0.42
Abca1P41233 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Abca1P41233 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.46□□□□□ -0.42
Abca1P41233 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.46□□□□□ -0.42
Abca1P41233 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Abca1P41233 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Abca1P41233 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Abca1P41233 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Abca1P41233 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Abca1P41233 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Abca1P41233 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms