Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.91□□□□□ -0.02
LdlrP35951 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LdlrP35951 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LdlrP35951 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LdlrP35951 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LdlrP35951 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Celf4-206ENSMUST00000224553 1729 ntBASIC14.9□□□□□ -0.02
LdlrP35951 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 Gm8344-201ENSMUST00000119813 856 ntBASIC14.9□□□□□ -0.02
LdlrP35951 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LdlrP35951 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LdlrP35951 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LdlrP35951 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LdlrP35951 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LdlrP35951 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LdlrP35951 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LdlrP35951 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
LdlrP35951 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.89□□□□□ -0.03
LdlrP35951 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.89□□□□□ -0.03
LdlrP35951 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.89□□□□□ -0.03
LdlrP35951 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
LdlrP35951 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
LdlrP35951 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LdlrP35951 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.88□□□□□ -0.03
LdlrP35951 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LdlrP35951 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LdlrP35951 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Gm15467-201ENSMUST00000120582 445 ntBASIC14.88□□□□□ -0.03
LdlrP35951 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LdlrP35951 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms