Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Foxa1P35582 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Foxa1P35582 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Foxa1P35582 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Foxa1P35582 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.85□□□□□ -0.19
Foxa1P35582 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.85□□□□□ -0.19
Foxa1P35582 Gm11779-201ENSMUST00000118541 368 ntBASIC13.85□□□□□ -0.19
Foxa1P35582 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.85□□□□□ -0.19
Foxa1P35582 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.85□□□□□ -0.19
Foxa1P35582 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.85□□□□□ -0.19
Foxa1P35582 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.85□□□□□ -0.19
Foxa1P35582 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.85□□□□□ -0.19
Foxa1P35582 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.85□□□□□ -0.19
Foxa1P35582 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Foxa1P35582 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Foxa1P35582 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Foxa1P35582 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.84□□□□□ -0.19
Foxa1P35582 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.84□□□□□ -0.19
Foxa1P35582 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.84□□□□□ -0.19
Foxa1P35582 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.84□□□□□ -0.19
Foxa1P35582 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.84□□□□□ -0.19
Foxa1P35582 Gm5177-201ENSMUST00000183092 997 ntBASIC13.84□□□□□ -0.19
Foxa1P35582 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.84□□□□□ -0.19
Foxa1P35582 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Foxa1P35582 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Foxa1P35582 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.84□□□□□ -0.19
Foxa1P35582 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.84□□□□□ -0.19
Foxa1P35582 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Foxa1P35582 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Foxa1P35582 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Foxa1P35582 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Foxa1P35582 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.83□□□□□ -0.19
Foxa1P35582 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxa1P35582 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Foxa1P35582 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms