Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.19■□□□□ 0.02
Slc6a13P31649 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Gm14494-201ENSMUST00000118786 435 ntBASIC15.19■□□□□ 0.02
Slc6a13P31649 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc6a13P31649 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Slc6a13P31649 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Slc6a13P31649 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.19■□□□□ 0.02
Slc6a13P31649 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a13P31649 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.18■□□□□ 0.02
Slc6a13P31649 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Slc6a13P31649 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc6a13P31649 Gm4995-201ENSMUST00000117247 432 ntBASIC15.18■□□□□ 0.02
Slc6a13P31649 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.18■□□□□ 0.02
Slc6a13P31649 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc6a13P31649 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Gm44492-201ENSMUST00000197012 141 ntBASIC15.18■□□□□ 0.02
Slc6a13P31649 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.18■□□□□ 0.02
Slc6a13P31649 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.18■□□□□ 0.02
Slc6a13P31649 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.18■□□□□ 0.02
Slc6a13P31649 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Slc6a13P31649 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc6a13P31649 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc6a13P31649 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
Slc6a13P31649 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.17■□□□□ 0.02
Slc6a13P31649 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Gm15467-201ENSMUST00000120582 445 ntBASIC15.17■□□□□ 0.02
Slc6a13P31649 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.17■□□□□ 0.02
Slc6a13P31649 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc6a13P31649 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
Slc6a13P31649 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Slc6a13P31649 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc6a13P31649 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc6a13P31649 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc6a13P31649 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Slc6a13P31649 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Slc6a13P31649 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc6a13P31649 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a13P31649 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a13P31649 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a13P31649 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc6a13P31649 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms