Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.06■□□□□ 0
RxrbP28704 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.06■□□□□ 0
RxrbP28704 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.06■□□□□ 0
RxrbP28704 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.06■□□□□ 0
RxrbP28704 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.06■□□□□ 0
RxrbP28704 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.06■□□□□ 0
RxrbP28704 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.06■□□□□ 0
RxrbP28704 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.06■□□□□ 0
RxrbP28704 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RxrbP28704 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RxrbP28704 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RxrbP28704 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.05■□□□□ 0
RxrbP28704 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RxrbP28704 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RxrbP28704 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
RxrbP28704 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RxrbP28704 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RxrbP28704 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.05■□□□□ -0
RxrbP28704 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RxrbP28704 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.05■□□□□ -0
RxrbP28704 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.05■□□□□ -0
RxrbP28704 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RxrbP28704 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.04■□□□□ -0
RxrbP28704 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.04■□□□□ -0
RxrbP28704 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.04■□□□□ -0
RxrbP28704 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Olfr129-201ENSMUST00000122318 993 ntBASIC15.04■□□□□ -0
RxrbP28704 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RxrbP28704 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.04■□□□□ -0
RxrbP28704 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.04■□□□□ -0
RxrbP28704 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RxrbP28704 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RxrbP28704 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
RxrbP28704 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.03■□□□□ -0
RxrbP28704 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.03■□□□□ -0
RxrbP28704 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.03■□□□□ -0
RxrbP28704 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.03■□□□□ -0
RxrbP28704 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.03■□□□□ -0
RxrbP28704 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RxrbP28704 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms