Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.39□□□□□ -0.11
BdnfP21237 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BdnfP21237 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.38□□□□□ -0.11
BdnfP21237 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
BdnfP21237 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Gm12644-201ENSMUST00000119935 606 ntBASIC14.38□□□□□ -0.11
BdnfP21237 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.38□□□□□ -0.11
BdnfP21237 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.38□□□□□ -0.11
BdnfP21237 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.38□□□□□ -0.11
BdnfP21237 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.38□□□□□ -0.11
BdnfP21237 Gm8655-201ENSMUST00000221159 852 ntBASIC14.38□□□□□ -0.11
BdnfP21237 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.38□□□□□ -0.11
BdnfP21237 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.38□□□□□ -0.11
BdnfP21237 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.38□□□□□ -0.11
BdnfP21237 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BdnfP21237 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.37□□□□□ -0.11
BdnfP21237 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BdnfP21237 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
BdnfP21237 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
BdnfP21237 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.37□□□□□ -0.11
BdnfP21237 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BdnfP21237 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
BdnfP21237 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.37□□□□□ -0.11
BdnfP21237 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
BdnfP21237 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
BdnfP21237 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.37□□□□□ -0.11
BdnfP21237 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.36□□□□□ -0.11
BdnfP21237 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BdnfP21237 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.36□□□□□ -0.11
BdnfP21237 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
BdnfP21237 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
BdnfP21237 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.36□□□□□ -0.11
BdnfP21237 Gm7977-201ENSMUST00000193787 748 ntBASIC14.36□□□□□ -0.11
BdnfP21237 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.36□□□□□ -0.11
BdnfP21237 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
BdnfP21237 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
BdnfP21237 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.36□□□□□ -0.11
BdnfP21237 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
BdnfP21237 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.36□□□□□ -0.11
BdnfP21237 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.36□□□□□ -0.11
BdnfP21237 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
BdnfP21237 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
BdnfP21237 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BdnfP21237 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms