Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prim1P20664 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prim1P20664 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prim1P20664 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Prim1P20664 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Prim1P20664 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.02■□□□□ 0.64
Prim1P20664 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Gm15693-201ENSMUST00000120470 637 ntBASIC19.02■□□□□ 0.64
Prim1P20664 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.02■□□□□ 0.64
Prim1P20664 Gm27618-201ENSMUST00000183671 60 ntBASIC19.02■□□□□ 0.64
Prim1P20664 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.02■□□□□ 0.64
Prim1P20664 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.02■□□□□ 0.64
Prim1P20664 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.02■□□□□ 0.64
Prim1P20664 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prim1P20664 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prim1P20664 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prim1P20664 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prim1P20664 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prim1P20664 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Prim1P20664 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prim1P20664 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Prim1P20664 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Prim1P20664 Gm6415-201ENSMUST00000118488 348 ntBASIC19.01■□□□□ 0.63
Prim1P20664 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Prim1P20664 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.01■□□□□ 0.63
Prim1P20664 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Prim1P20664 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Prim1P20664 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prim1P20664 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prim1P20664 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Prim1P20664 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Prim1P20664 Gm13223-201ENSMUST00000118609 747 ntBASIC19■□□□□ 0.63
Prim1P20664 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19■□□□□ 0.63
Prim1P20664 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
Prim1P20664 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prim1P20664 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prim1P20664 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Prim1P20664 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.99■□□□□ 0.63
Prim1P20664 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Prim1P20664 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Gm18737-201ENSMUST00000173594 937 ntBASIC18.99■□□□□ 0.63
Prim1P20664 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.99■□□□□ 0.63
Prim1P20664 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.99■□□□□ 0.63
Prim1P20664 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Prim1P20664 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prim1P20664 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Prim1P20664 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Prim1P20664 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prim1P20664 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms