Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rc3h2P0C090 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.22■□□□□ 0.03
Rc3h2P0C090 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.22■□□□□ 0.03
Rc3h2P0C090 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.22■□□□□ 0.03
Rc3h2P0C090 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.22■□□□□ 0.03
Rc3h2P0C090 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rc3h2P0C090 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.21■□□□□ 0.03
Rc3h2P0C090 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Gm38225-201ENSMUST00000194001 393 ntBASIC15.21■□□□□ 0.03
Rc3h2P0C090 Gm5779-201ENSMUST00000218467 910 ntBASIC15.21■□□□□ 0.03
Rc3h2P0C090 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rc3h2P0C090 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h2P0C090 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h2P0C090 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h2P0C090 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.21■□□□□ 0.02
Rc3h2P0C090 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h2P0C090 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Rc3h2P0C090 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h2P0C090 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rc3h2P0C090 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.2■□□□□ 0.02
Rc3h2P0C090 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rc3h2P0C090 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Gm14057-201ENSMUST00000120631 482 ntBASIC15.2■□□□□ 0.02
Rc3h2P0C090 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rc3h2P0C090 Gm43767-201ENSMUST00000198933 381 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms