Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC9.49□□□□□ -0.89
P06320 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC9.49□□□□□ -0.89
P06320 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC9.49□□□□□ -0.89
P06320 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC9.49□□□□□ -0.89
P06320 Gm10052-201ENSMUST00000168019 960 ntBASIC9.49□□□□□ -0.89
P06320 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
P06320 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
P06320 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
P06320 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC9.49□□□□□ -0.89
P06320 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 AC153881.1-201ENSMUST00000214448 284 ntBASIC9.49□□□□□ -0.89
P06320 AC122351.1-201ENSMUST00000220467 126 ntBASIC9.49□□□□□ -0.89
P06320 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Gm7729-201ENSMUST00000050143 801 ntBASIC9.49□□□□□ -0.89
P06320 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
P06320 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
P06320 Gm5049-201ENSMUST00000195878 1590 ntBASIC9.49□□□□□ -0.89
P06320 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
P06320 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
P06320 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
P06320 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC9.48□□□□□ -0.89
P06320 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
P06320 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.48□□□□□ -0.89
P06320 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC9.48□□□□□ -0.89
P06320 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC9.48□□□□□ -0.89
P06320 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
P06320 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC9.48□□□□□ -0.89
P06320 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC9.48□□□□□ -0.89
P06320 AC164629.5-201ENSMUST00000220387 632 ntBASIC9.48□□□□□ -0.89
P06320 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Gm7367-201ENSMUST00000057611 492 ntBASIC9.48□□□□□ -0.89
P06320 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
P06320 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
P06320 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
P06320 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P06320 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC9.47□□□□□ -0.89
P06320 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 AC121805.2-201ENSMUST00000218808 2538 ntBASIC9.47□□□□□ -0.89
P06320 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC9.47□□□□□ -0.89
P06320 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
P06320 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Fbxl12-205ENSMUST00000140702 1555 ntBASIC9.47□□□□□ -0.89
P06320 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06320 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms