Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.14□□□□□ -0.47
P04940 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P04940 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
P04940 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
P04940 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.13□□□□□ -0.47
P04940 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
P04940 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.13□□□□□ -0.47
P04940 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.13□□□□□ -0.47
P04940 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.13□□□□□ -0.47
P04940 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.13□□□□□ -0.47
P04940 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.13□□□□□ -0.47
P04940 Psmb5-202ENSMUST00000227257 622 ntBASIC12.13□□□□□ -0.47
P04940 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
P04940 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
P04940 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
P04940 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P04940 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.13□□□□□ -0.47
P04940 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P04940 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
P04940 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P04940 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.12□□□□□ -0.47
P04940 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.12□□□□□ -0.47
P04940 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P04940 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.12□□□□□ -0.47
P04940 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Gm7461-201ENSMUST00000058918 827 ntBASIC12.12□□□□□ -0.47
P04940 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
P04940 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.12□□□□□ -0.47
P04940 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.12□□□□□ -0.47
P04940 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P04940 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P04940 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P04940 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
P04940 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.11□□□□□ -0.47
P04940 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.11□□□□□ -0.47
P04940 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
P04940 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Carlr-201ENSMUST00000181515 2574 ntBASIC12.11□□□□□ -0.47
P04940 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P04940 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms