Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.33■□□□□ 0.04
P01878 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.33■□□□□ 0.04
P01878 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.33■□□□□ 0.04
P01878 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.33■□□□□ 0.04
P01878 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.33■□□□□ 0.04
P01878 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P01878 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
P01878 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.33■□□□□ 0.04
P01878 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Syt7-205ENSMUST00000224135 1557 ntBASIC15.32■□□□□ 0.04
P01878 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.32■□□□□ 0.04
P01878 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
P01878 Gm29667-201ENSMUST00000190817 490 ntBASIC15.32■□□□□ 0.04
P01878 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.32■□□□□ 0.04
P01878 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.32■□□□□ 0.04
P01878 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
P01878 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01878 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.32■□□□□ 0.04
P01878 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01878 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.31■□□□□ 0.04
P01878 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Gm6222-201ENSMUST00000120787 396 ntBASIC15.31■□□□□ 0.04
P01878 Gm11424-201ENSMUST00000121929 829 ntBASIC15.31■□□□□ 0.04
P01878 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01878 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.31■□□□□ 0.04
P01878 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.31■□□□□ 0.04
P01878 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
P01878 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P01878 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.31■□□□□ 0.04
P01878 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.31■□□□□ 0.04
P01878 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P01878 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.31■□□□□ 0.04
P01878 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.31■□□□□ 0.04
P01878 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
P01878 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
P01878 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Gm4875-201ENSMUST00000118257 786 ntBASIC15.3■□□□□ 0.04
P01878 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
P01878 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.3■□□□□ 0.04
P01878 BC037039-201ENSMUST00000192003 2205 ntBASIC15.3■□□□□ 0.04
P01878 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P01878 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms