Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P01728 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.74□□□□□ -0.53
P01728 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.74□□□□□ -0.53
P01728 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.74□□□□□ -0.53
P01728 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
P01728 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P01728 Gm43767-201ENSMUST00000198933 381 ntBASIC11.74□□□□□ -0.53
P01728 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.74□□□□□ -0.53
P01728 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.74□□□□□ -0.53
P01728 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.74□□□□□ -0.53
P01728 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.74□□□□□ -0.53
P01728 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
P01728 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.74□□□□□ -0.53
P01728 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P01728 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.74□□□□□ -0.53
P01728 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P01728 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01728 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.73□□□□□ -0.53
P01728 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P01728 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P01728 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.73□□□□□ -0.53
P01728 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.73□□□□□ -0.53
P01728 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P01728 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P01728 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P01728 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.73□□□□□ -0.53
P01728 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
P01728 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P01728 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
P01728 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.72□□□□□ -0.53
P01728 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.72□□□□□ -0.53
P01728 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
P01728 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.72□□□□□ -0.53
P01728 Gm9013-201ENSMUST00000132939 882 ntBASIC11.72□□□□□ -0.53
P01728 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.72□□□□□ -0.53
P01728 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P01728 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.72□□□□□ -0.53
P01728 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
P01728 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms