Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn3O88705 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hcn3O88705 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.37□□□□□ -0.11
Hcn3O88705 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hcn3O88705 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hcn3O88705 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Hcn3O88705 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hcn3O88705 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.37□□□□□ -0.11
Hcn3O88705 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.37□□□□□ -0.11
Hcn3O88705 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.37□□□□□ -0.11
Hcn3O88705 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.37□□□□□ -0.11
Hcn3O88705 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hcn3O88705 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Hcn3O88705 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Gm14722-201ENSMUST00000118943 689 ntBASIC14.36□□□□□ -0.11
Hcn3O88705 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.36□□□□□ -0.11
Hcn3O88705 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.36□□□□□ -0.11
Hcn3O88705 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hcn3O88705 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.36□□□□□ -0.11
Hcn3O88705 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcn3O88705 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.35□□□□□ -0.11
Hcn3O88705 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.35□□□□□ -0.11
Hcn3O88705 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hcn3O88705 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hcn3O88705 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.34□□□□□ -0.11
Hcn3O88705 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hcn3O88705 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcn3O88705 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.34□□□□□ -0.11
Hcn3O88705 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hcn3O88705 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcn3O88705 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms