Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tulp3O88413 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14□□□□□ -0.17
Tulp3O88413 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Tulp3O88413 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Gm25745-201ENSMUST00000174945 133 ntBASIC14□□□□□ -0.17
Tulp3O88413 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14□□□□□ -0.17
Tulp3O88413 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14□□□□□ -0.17
Tulp3O88413 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14□□□□□ -0.17
Tulp3O88413 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tulp3O88413 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tulp3O88413 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14□□□□□ -0.17
Tulp3O88413 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tulp3O88413 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.99□□□□□ -0.17
Tulp3O88413 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Tulp3O88413 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.99□□□□□ -0.17
Tulp3O88413 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.99□□□□□ -0.17
Tulp3O88413 Gm15165-201ENSMUST00000118140 502 ntBASIC13.99□□□□□ -0.17
Tulp3O88413 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.99□□□□□ -0.17
Tulp3O88413 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tulp3O88413 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.99□□□□□ -0.17
Tulp3O88413 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.99□□□□□ -0.17
Tulp3O88413 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.99□□□□□ -0.17
Tulp3O88413 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.99□□□□□ -0.17
Tulp3O88413 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tulp3O88413 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Tulp3O88413 Gm12008-201ENSMUST00000117791 755 ntBASIC13.98□□□□□ -0.17
Tulp3O88413 Gm4459-201ENSMUST00000118750 468 ntBASIC13.98□□□□□ -0.17
Tulp3O88413 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.98□□□□□ -0.17
Tulp3O88413 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tulp3O88413 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tulp3O88413 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tulp3O88413 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tulp3O88413 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tulp3O88413 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tulp3O88413 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms