Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Banf1O54962 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Banf1O54962 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Banf1O54962 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Banf1O54962 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.26■□□□□ 0.03
Banf1O54962 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Banf1O54962 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Banf1O54962 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Banf1O54962 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.26■□□□□ 0.03
Banf1O54962 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Banf1O54962 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Banf1O54962 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.25■□□□□ 0.03
Banf1O54962 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Gm13418-201ENSMUST00000119097 944 ntBASIC15.25■□□□□ 0.03
Banf1O54962 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.25■□□□□ 0.03
Banf1O54962 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.25■□□□□ 0.03
Banf1O54962 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.25■□□□□ 0.03
Banf1O54962 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Banf1O54962 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Banf1O54962 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Banf1O54962 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.24■□□□□ 0.03
Banf1O54962 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.24■□□□□ 0.03
Banf1O54962 Ank2-226ENSMUST00000189368 339 ntBASIC15.24■□□□□ 0.03
Banf1O54962 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.24■□□□□ 0.03
Banf1O54962 Gm18669-201ENSMUST00000216049 778 ntBASIC15.24■□□□□ 0.03
Banf1O54962 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Banf1O54962 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Banf1O54962 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Banf1O54962 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Banf1O54962 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Banf1O54962 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Banf1O54962 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Banf1O54962 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.23■□□□□ 0.03
Banf1O54962 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Banf1O54962 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Banf1O54962 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.23■□□□□ 0.03
Banf1O54962 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Banf1O54962 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.23■□□□□ 0.03
Banf1O54962 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms