Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.63□□□□□ -0.07
Npc1O35604 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Gm12008-201ENSMUST00000117791 755 ntBASIC14.63□□□□□ -0.07
Npc1O35604 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.63□□□□□ -0.07
Npc1O35604 Gm10499-201ENSMUST00000174094 934 ntBASIC14.63□□□□□ -0.07
Npc1O35604 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.63□□□□□ -0.07
Npc1O35604 Gm5867-201ENSMUST00000063197 592 ntBASIC14.63□□□□□ -0.07
Npc1O35604 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Npc1O35604 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.63□□□□□ -0.07
Npc1O35604 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Npc1O35604 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.62□□□□□ -0.07
Npc1O35604 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Npc1O35604 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.62□□□□□ -0.07
Npc1O35604 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Npc1O35604 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.62□□□□□ -0.07
Npc1O35604 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.62□□□□□ -0.07
Npc1O35604 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Npc1O35604 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Npc1O35604 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.62□□□□□ -0.07
Npc1O35604 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Npc1O35604 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Npc1O35604 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.61□□□□□ -0.07
Npc1O35604 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Npc1O35604 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Npc1O35604 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.61□□□□□ -0.07
Npc1O35604 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.61□□□□□ -0.07
Npc1O35604 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.61□□□□□ -0.07
Npc1O35604 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Npc1O35604 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Npc1O35604 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Npc1O35604 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Npc1O35604 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.6□□□□□ -0.07
Npc1O35604 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Npc1O35604 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Npc1O35604 Gm27702-201ENSMUST00000184512 56 ntBASIC14.6□□□□□ -0.07
Npc1O35604 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Thap2-203ENSMUST00000218989 527 ntBASIC14.6□□□□□ -0.07
Npc1O35604 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Npc1O35604 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Npc1O35604 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Npc1O35604 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Npc1O35604 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms