Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Stx1aO35526 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Stx1aO35526 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Stx1aO35526 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.86■□□□□ 0.29
Stx1aO35526 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.86■□□□□ 0.29
Stx1aO35526 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.86■□□□□ 0.29
Stx1aO35526 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Stx1aO35526 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Stx1aO35526 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Stx1aO35526 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Stx1aO35526 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Stx1aO35526 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.85■□□□□ 0.29
Stx1aO35526 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.85■□□□□ 0.29
Stx1aO35526 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Stx1aO35526 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Stx1aO35526 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Stx1aO35526 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Stx1aO35526 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.84■□□□□ 0.29
Stx1aO35526 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Stx1aO35526 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Stx1aO35526 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Stx1aO35526 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.84■□□□□ 0.29
Stx1aO35526 Gm10499-201ENSMUST00000174094 934 ntBASIC16.84■□□□□ 0.29
Stx1aO35526 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.84■□□□□ 0.29
Stx1aO35526 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.84■□□□□ 0.29
Stx1aO35526 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Stx1aO35526 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.84■□□□□ 0.29
Stx1aO35526 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Stx1aO35526 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Stx1aO35526 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Stx1aO35526 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Stx1aO35526 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Stx1aO35526 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Stx1aO35526 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Stx1aO35526 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.83■□□□□ 0.28
Stx1aO35526 Gm8097-201ENSMUST00000117903 829 ntBASIC16.83■□□□□ 0.28
Stx1aO35526 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.83■□□□□ 0.28
Stx1aO35526 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Stx1aO35526 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Stx1aO35526 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Stx1aO35526 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms