Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.43□□□□□ -0.1
Clk4O35493 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk4O35493 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.42□□□□□ -0.1
Clk4O35493 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.42□□□□□ -0.1
Clk4O35493 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clk4O35493 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Clk4O35493 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clk4O35493 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clk4O35493 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk4O35493 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk4O35493 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.42□□□□□ -0.1
Clk4O35493 Psmb5-202ENSMUST00000227257 622 ntBASIC14.42□□□□□ -0.1
Clk4O35493 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clk4O35493 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.42□□□□□ -0.1
Clk4O35493 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clk4O35493 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk4O35493 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk4O35493 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.41□□□□□ -0.1
Clk4O35493 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.41□□□□□ -0.1
Clk4O35493 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.41□□□□□ -0.1
Clk4O35493 Gm45167-201ENSMUST00000208007 322 ntBASIC14.41□□□□□ -0.1
Clk4O35493 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clk4O35493 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.41□□□□□ -0.1
Clk4O35493 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk4O35493 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.4□□□□□ -0.1
Clk4O35493 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.4□□□□□ -0.1
Clk4O35493 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Clk4O35493 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.4□□□□□ -0.1
Clk4O35493 Gm43514-201ENSMUST00000198852 424 ntBASIC14.4□□□□□ -0.1
Clk4O35493 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.4□□□□□ -0.1
Clk4O35493 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.4□□□□□ -0.1
Clk4O35493 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Clk4O35493 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk4O35493 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms