Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Efnb3O35393 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Efnb3O35393 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Efnb3O35393 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Efnb3O35393 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.86□□□□□ -0.51
Efnb3O35393 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Gm14859-201ENSMUST00000117752 357 ntBASIC11.86□□□□□ -0.51
Efnb3O35393 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.86□□□□□ -0.51
Efnb3O35393 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Efnb3O35393 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Efnb3O35393 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.86□□□□□ -0.51
Efnb3O35393 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Efnb3O35393 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.86□□□□□ -0.51
Efnb3O35393 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Efnb3O35393 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.86□□□□□ -0.51
Efnb3O35393 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.86□□□□□ -0.51
Efnb3O35393 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Efnb3O35393 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Efnb3O35393 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Carlr-201ENSMUST00000181515 2574 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Efnb3O35393 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Efnb3O35393 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Efnb3O35393 Gm27704-201ENSMUST00000185094 107 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Gm9172-201ENSMUST00000212092 954 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Grk6-207ENSMUST00000225925 2769 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.85□□□□□ -0.51
Efnb3O35393 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.85□□□□□ -0.51
Efnb3O35393 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Efnb3O35393 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Efnb3O35393 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms