Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 BC037039-201ENSMUST00000192003 2205 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm8825-201ENSMUST00000182565 998 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm4518-201ENSMUST00000182638 718 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm5587-201ENSMUST00000206270 674 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Gm19164-201ENSMUST00000210667 640 ntBASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc71lE9Q4T4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms