Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Syce3B5KM66 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Syce3B5KM66 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Syce3B5KM66 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Syce3B5KM66 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Syce3B5KM66 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Syce3B5KM66 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.15■□□□□ 0.34
Syce3B5KM66 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Syce3B5KM66 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.15■□□□□ 0.34
Syce3B5KM66 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.15■□□□□ 0.34
Syce3B5KM66 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.15■□□□□ 0.34
Syce3B5KM66 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Syce3B5KM66 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Syce3B5KM66 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Syce3B5KM66 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Syce3B5KM66 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.14■□□□□ 0.33
Syce3B5KM66 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Syce3B5KM66 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syce3B5KM66 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms