Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12d-1A0N8R0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Gm15372-201ENSMUST00000120729 834 ntBASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Gm27867-201ENSMUST00000184778 125 ntBASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-1A0N8R0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-1A0N8R0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms