Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav16A0A075B653 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gm14722-201ENSMUST00000118943 689 ntBASIC11.6□□□□□ -0.55
Trav16A0A075B653 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gm25406-201ENSMUST00000157599 105 ntBASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gm18101-201ENSMUST00000215769 548 ntBASIC11.6□□□□□ -0.55
Trav16A0A075B653 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.6□□□□□ -0.55
Trav16A0A075B653 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav16A0A075B653 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.59□□□□□ -0.55
Trav16A0A075B653 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.59□□□□□ -0.55
Trav16A0A075B653 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.59□□□□□ -0.55
Trav16A0A075B653 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.59□□□□□ -0.55
Trav16A0A075B653 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16A0A075B653 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trav16A0A075B653 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav16A0A075B653 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav16A0A075B653 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.58□□□□□ -0.55
Trav16A0A075B653 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Mir770-201ENSMUST00000103252 94 ntBASIC11.58□□□□□ -0.56
Trav16A0A075B653 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.58□□□□□ -0.56
Trav16A0A075B653 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.58□□□□□ -0.56
Trav16A0A075B653 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16A0A075B653 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms