Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Celf4-206ENSMUST00000224553 1729 ntBASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm12008-201ENSMUST00000117791 755 ntBASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm8344-201ENSMUST00000119813 856 ntBASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Rprl3-201ENSMUST00000157400 290 ntBASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.72□□□□□ -0.37
Cx3cr1Q9Z0D9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Gm5587-201ENSMUST00000206270 674 ntBASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cr1Q9Z0D9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cr1Q9Z0D9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Gm6433-201ENSMUST00000118634 875 ntBASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.7□□□□□ -0.38
Cx3cr1Q9Z0D9 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms