Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CcsQ9WU84 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
CcsQ9WU84 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CcsQ9WU84 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.7□□□□□ -0.54
CcsQ9WU84 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.7□□□□□ -0.54
CcsQ9WU84 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Mir770-201ENSMUST00000103252 94 ntBASIC11.7□□□□□ -0.54
CcsQ9WU84 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gm6623-201ENSMUST00000173570 544 ntBASIC11.7□□□□□ -0.54
CcsQ9WU84 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gm45328-201ENSMUST00000210942 917 ntBASIC11.7□□□□□ -0.54
CcsQ9WU84 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CcsQ9WU84 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CcsQ9WU84 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Gm11336-201ENSMUST00000118168 334 ntBASIC11.69□□□□□ -0.54
CcsQ9WU84 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.69□□□□□ -0.54
CcsQ9WU84 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
CcsQ9WU84 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CcsQ9WU84 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Gm10819-201ENSMUST00000099988 561 ntBASIC11.68□□□□□ -0.54
CcsQ9WU84 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CcsQ9WU84 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CcsQ9WU84 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms