Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn2Q9R0A1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Gm7230-201ENSMUST00000173026 815 ntBASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn2Q9R0A1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Gm18195-201ENSMUST00000207604 706 ntBASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Clcn2Q9R0A1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.33■□□□□ 0.05
Clcn2Q9R0A1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Gm27646-201ENSMUST00000183989 110 ntBASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Clcn2Q9R0A1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.32■□□□□ 0.04
Clcn2Q9R0A1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms