Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Mir3113-201ENSMUST00000175478 76 ntBASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Gm10175-201ENSMUST00000086013 645 ntBASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clcf1Q9QZM3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Clcf1Q9QZM3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Clcf1Q9QZM3 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clcf1Q9QZM3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Gm14722-201ENSMUST00000118943 689 ntBASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clcf1Q9QZM3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms