Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm25016-201ENSMUST00000158399 131 ntBASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm4Q9QXA5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm15358-201ENSMUST00000119249 520 ntBASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm25745-201ENSMUST00000174945 133 ntBASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm4Q9QXA5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm4Q9QXA5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms