Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Matn2-206ENSMUST00000228570 2798 ntBASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gm13474-201ENSMUST00000122466 815 ntBASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rhox4bQ9JI43 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rhox4bQ9JI43 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rhox4bQ9JI43 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.15□□□□□ -0.47
Rhox4bQ9JI43 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rhox4bQ9JI43 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rhox4bQ9JI43 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rhox4bQ9JI43 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rhox4bQ9JI43 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rhox4bQ9JI43 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rhox4bQ9JI43 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms