Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf13bQ9ET35 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm15165-201ENSMUST00000118140 502 ntBASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Mir6982-201ENSMUST00000184354 68 ntBASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf13bQ9ET35 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm15358-201ENSMUST00000119249 520 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm25016-201ENSMUST00000158399 131 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm10231-201ENSMUST00000181584 441 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm7506-201ENSMUST00000207758 815 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Gm10175-202ENSMUST00000208752 441 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf13bQ9ET35 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms