Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim13Q9CYB0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim13Q9CYB0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim13Q9CYB0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim13Q9CYB0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim13Q9CYB0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm8825-201ENSMUST00000182565 998 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm4518-201ENSMUST00000182638 718 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim13Q9CYB0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms