Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cldnd1Q9CQX5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cldnd1Q9CQX5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Gm6222-201ENSMUST00000120787 396 ntBASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cldnd1Q9CQX5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cldnd1Q9CQX5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm29310-201ENSMUST00000185468 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21825-201ENSMUST00000185728 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm29109-201ENSMUST00000185895 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm28760-201ENSMUST00000185995 736 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21896-201ENSMUST00000186520 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21873-201ENSMUST00000186728 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21794-201ENSMUST00000187056 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21880-201ENSMUST00000187275 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21826-201ENSMUST00000187451 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21198-201ENSMUST00000188393 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21749-201ENSMUST00000189343 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21901-201ENSMUST00000189568 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm29424-201ENSMUST00000189716 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm28599-201ENSMUST00000189838 694 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21867-201ENSMUST00000189917 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm29269-201ENSMUST00000190087 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21722-201ENSMUST00000190153 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm28423-201ENSMUST00000190701 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21899-201ENSMUST00000190745 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21910-201ENSMUST00000191163 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21849-201ENSMUST00000191571 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm28678-201ENSMUST00000191593 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm20910-201ENSMUST00000193268 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 Gm21871-201ENSMUST00000194621 696 ntBASIC15.26■□□□□ 0.03
Cldnd1Q9CQX5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms