Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim11Q99PQ2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim11Q99PQ2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.09■□□□□ 0.33
Trim11Q99PQ2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trim11Q99PQ2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim11Q99PQ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim11Q99PQ2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim11Q99PQ2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim11Q99PQ2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim11Q99PQ2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim11Q99PQ2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms