Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm15321-201ENSMUST00000121290 288 ntBASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-1Q99MA9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-1Q99MA9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-1Q99MA9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Gm6912-201ENSMUST00000117218 544 ntBASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Gm45384-201ENSMUST00000210451 277 ntBASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-1Q99MA9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms