Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.13■□□□□ 0.49
LRRC39Q96DD0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 AL157888.1-201ENST00000631930 593 ntBASIC18.13■□□□□ 0.49
LRRC39Q96DD0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRC39Q96DD0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 ECEL1P3-201ENST00000427961 737 ntBASIC18.12■□□□□ 0.49
LRRC39Q96DD0 KRT18P65-201ENST00000439811 1286 ntBASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TMEM191A-211ENST00000637163 1067 ntBASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC39Q96DD0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 FZD10-202ENST00000539839 3282 ntBASIC18.11■□□□□ 0.49
LRRC39Q96DD0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 ECEL1P2-202ENST00000465689 757 ntBASIC18.11■□□□□ 0.49
LRRC39Q96DD0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LRRC39Q96DD0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms