Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nudcd3Q8R1N4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Gm17808-201ENSMUST00000200859 894 ntBASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nudcd3Q8R1N4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.02□□□□□ -0.01
Nudcd3Q8R1N4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Gm8344-201ENSMUST00000119813 856 ntBASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Gm18622-201ENSMUST00000219361 595 ntBASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nudcd3Q8R1N4 Celf4-206ENSMUST00000224553 1729 ntBASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Gm43195-201ENSMUST00000200614 2332 ntBASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Gm9856-201ENSMUST00000217077 2578 ntBASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nudcd3Q8R1N4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms