Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpp40Q8R1F9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpp40Q8R1F9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Gm13365-201ENSMUST00000121188 973 ntBASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpp40Q8R1F9 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpp40Q8R1F9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.03■□□□□ 0.16
Rpp40Q8R1F9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms