Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atf7Q8R0S1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Atf7Q8R0S1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Atf7Q8R0S1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Atf7Q8R0S1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atf7Q8R0S1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Gm18733-201ENSMUST00000173950 856 ntBASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atf7Q8R0S1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Gm12008-201ENSMUST00000117791 755 ntBASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Gm13597-201ENSMUST00000121239 375 ntBASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atf7Q8R0S1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.67■□□□□ 0.42
Atf7Q8R0S1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atf7Q8R0S1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms