Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.35□□□□□ -0.11
CroccQ8CJ40 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.35□□□□□ -0.11
CroccQ8CJ40 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CroccQ8CJ40 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.34□□□□□ -0.11
CroccQ8CJ40 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Gm9727-201ENSMUST00000161387 555 ntBASIC14.34□□□□□ -0.11
CroccQ8CJ40 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.34□□□□□ -0.11
CroccQ8CJ40 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CroccQ8CJ40 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.34□□□□□ -0.11
CroccQ8CJ40 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CroccQ8CJ40 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CroccQ8CJ40 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.33□□□□□ -0.12
CroccQ8CJ40 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CroccQ8CJ40 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CroccQ8CJ40 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Gm27525-201ENSMUST00000184465 107 ntBASIC14.32□□□□□ -0.12
CroccQ8CJ40 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CroccQ8CJ40 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.32□□□□□ -0.12
CroccQ8CJ40 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms