Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Gm6443-201ENSMUST00000203599 874 ntBASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfwd3Q8CIK8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Gm14140-201ENSMUST00000119999 995 ntBASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Rfwd3Q8CIK8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfwd3Q8CIK8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm10499-201ENSMUST00000174094 934 ntBASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfwd3Q8CIK8 Gm27300-201ENSMUST00000184085 97 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms