Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim5Q8CI51 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim5Q8CI51 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Gm10499-201ENSMUST00000174094 934 ntBASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Rps4l-201ENSMUST00000071745 943 ntBASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim5Q8CI51 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Gm37153-201ENSMUST00000193637 231 ntBASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.8□□□□□ -0.2
Pdlim5Q8CI51 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms