Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Gm23634-201ENSMUST00000175071 91 ntBASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Gm29518-201ENSMUST00000190858 372 ntBASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lysmd4Q8CC84 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lysmd4Q8CC84 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gm4459-201ENSMUST00000118750 468 ntBASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gm15358-201ENSMUST00000119249 520 ntBASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gm12497-201ENSMUST00000138778 237 ntBASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lysmd4Q8CC84 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lysmd4Q8CC84 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lysmd4Q8CC84 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms