Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx1Q8C8B0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Efs-202ENSMUST00000227037 2540 ntBASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx1Q8C8B0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Gm18889-201ENSMUST00000174284 929 ntBASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx1Q8C8B0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.47■□□□□ 0.39
Alx1Q8C8B0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Gm27920-201ENSMUST00000183953 96 ntBASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx1Q8C8B0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Alx1Q8C8B0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Alx1Q8C8B0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Alx1Q8C8B0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms