Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tsen54Q8C2A2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tsen54Q8C2A2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tsen54Q8C2A2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Gm14859-201ENSMUST00000117752 357 ntBASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tsen54Q8C2A2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tsen54Q8C2A2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tsen54Q8C2A2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.58□□□□□ -0.39
Tsen54Q8C2A2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Gm7367-201ENSMUST00000057611 492 ntBASIC12.58□□□□□ -0.4
Tsen54Q8C2A2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms