Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Gm12895-201ENSMUST00000122214 226 ntBASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.8■□□□□ 0.28
Fam43aQ8BUP8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam43aQ8BUP8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam43aQ8BUP8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Rprl3-201ENSMUST00000157400 290 ntBASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
Fam43aQ8BUP8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam43aQ8BUP8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Fam43aQ8BUP8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam43aQ8BUP8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam43aQ8BUP8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam43aQ8BUP8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Fam43aQ8BUP8 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.76■□□□□ 0.27
Fam43aQ8BUP8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms